Publications
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2006. TreePlus: Interactive Exploration of Networks with Enhanced Tree Layouts. Visualization and Computer Graphics, IEEE Transactions on. 12(6):1414-1426.
2007. TREMOR—a tool for retrieving transcriptional modules by incorporating motif covariance. Nucleic Acids Research. 35(21):7360-7371.
1998. Trends in the early careers of life scientists - Preface and executive summary. Mol Biol Cell. 9(11):3007-3015.
2009. Triaging Checklists: a Substitute for a PhD in Static Analysis. Evaluation and Usability of Programming Languages and Tools (PLATEAU) PLATEAU 2009.
1997. The Triangular Matrices of Gaussian Elimination and Related Decompositions. IMA Journal of Numerical Analysis. 17(1):7-16.
2000. A Trip Report on Creativity and Cognition 1999: An Insider's Report on a Far Out Conference. SIGCHI BULLETIN. 32(1):43-46.
2008. Trusting spam reporters: A reporter-based reputation system for email filtering. ACM Transactions on Information Systems (TOIS). 27(1):3:1–3:27-3:1–3:27.
2006. The Trypanosoma cruzi L1Tc and NARTc non-LTR retrotransposons show relative site specificity for insertion. Molecular biology and evolution. 23(2):411-411.
2006. Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region. BMC Genomics. 7(1):60-60.
2002. Trypanosoma cruzi: RNA structure and post-transcriptional control of tubulin gene expression. Experimental Parasitology. 102(3-4):123-133.
2008. A Tutorial of the Poisson Random Field Model in Population Genetics. Advances in Bioinformatics. 2008:1-9.
2011. Tutorial-Graph Analytics — Lessons Learned and Challenges Ahead. IEEE Computer Graphics and Applications. 31(5):18-18.
2009. Two Alternatively Spliced Isoforms of the Arabidopsis SR45 Protein Have Distinct Roles during Normal Plant Development. Plant PhysiologyPlant Physiol.. 150(3):1450-1458.
1978. Two experimental comparisons of relational and hierarchical database models. International Journal of Man-Machine Studies. 10(6):625-637.
2003. Two methods for solving a 3D acoustic inverse scattering problem. The Journal of the Acoustical Society of America. 113(4):2191-2191.
2005. Two-server password-only authenticated key exchange. Applied Cryptography and Network Security. :175-206.
2012. Two-server password-only authenticated key exchange. Journal of Computer and System Sciences. 78(2):651-669.
2005. A Type and Effect System for Flexible Abstract Interpretation of Java: (Extended Abstract). Electronic Notes in Theoretical Computer Science. 131:111-124.