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2005. A Knowledge Integration Framework for Information Visualization. From Integrated Publication and Information Systems to Information and Knowledge EnvironmentsFrom Integrated Publication and Information Systems to Information and Knowledge Environments. 3379:207-220.
2003. Interactive color mosaic and dendrogram displays for signal/noise optimization in microarray data analysis. Multimedia and Expo, 2003. ICME'03. Proceedings. 2003 International Conference on. 3:III–461-III–461.
2003. Understanding Hierarchical Clustering Results by Interactive Exploration of Dendrograms: A Case Study with Genomic Microarray Data. Technical Reports from UMIACS.
2006. Knowledge discovery in high-dimensional data: case studies and a user survey for the rank-by-feature framework. IEEE Transactions on Visualization and Computer Graphics. 12(3):311-322.
2009. Multidimensional Analysis and Visualization on Large Biomedical Data. Statistical Bioinformatics. :157-184.
2005. Understanding Clusters in Multidimensional Spaces: Making Meaning by Combining Insights from Coordinated Views of Domain Knowledge (2004). Institute for Systems Research Technical Reports.
2005. Interactive Color Mosaic and Dendogram Displays for Signal/Noise Optimization in Microarray Data Analysis (2003). Institute for Systems Research Technical Reports.
2004. Interactively Optimizing Signal-to-Noise Ratios in Expression Profiling: Project-Specific Algorithm Selection and Detection P-Value Weighting in Affymetrix Microarrays. BioinformaticsBioinformatics. 20(16):2534-2544.
2004. A Rank-by-Feature Framework for Unsupervised Multidimensional Data Exploration Using Low Dimensional Projections. IEEE Symposium on Information Visualization, 2004. INFOVIS 2004. :65-72.
2005. Knowledge Discovery in High Dimensional Data: Case Studies and a User Survey for an Information Visualization Tool. Institute for Systems Research Technical Reports.
2005. Using Categorical Information in Multidimensional Data Sets: Interactive Partition and Cluster Comparison. Institute for Systems Research Technical Reports.
2002. Interactively exploring hierarchical clustering results [gene identification]. Computer. 35(7):80-86.
2005. Building a Coherent Data Pipeline in Microarray Data Analyses: Optimization of Signal/Noise Ratios Using an Interactive Visualization Tool and a Novel Noise Filtering Method (2003). Institute for Systems Research Technical Reports.
2005. A Rank-by-Feature Framework for Interactive Exploration of Multidimensional Data (2004). Institute for Systems Research Technical Reports.
2002. Evolution in Action: Using Active Networking to Evolve Network Support for Mobility. Active NetworksActive Networks. 2546:146-161.
2006. Parametric Hand Tracking for Recognition of Virtual Drawings. Computer Vision Systems, 2006 ICVS '06. IEEE International Conference on. :6-6.
2009. Analytical Description of Quasi-Random Magnetization Relaxation to Equilibrium. Magnetics, IEEE Transactions on. 45(11):5224-5227.
2005. Pioneer: verifying code integrity and enforcing untampered code execution on legacy systems. ACM SIGOPS Operating Systems Review. 39(5):1-16.
2008. A Tutorial of the Poisson Random Field Model in Population Genetics. Advances in Bioinformatics. 2008:1-9.
2008. Genome-Wide Analysis of Natural Selection on Human Cis-Elements. PLoS ONEPLoS ONE. 3(9):e3137-e3137.
2009. Topological ordering of function words in hierarchical phrase-based translation. Proceedings of the Joint Conference of the 47th Annual Meeting of the ACL and the 4th International Joint Conference on Natural Language Processing of the AFNLP: Volume 1-Volume 1. :324-332.
2008. Dynamic Rebinding for Marshalling and Update, Via Redex-Time and Destruct-Time Reduction. Journal of Functional Programming. 18(04):437-502.