Publications
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2004. Abstracting workflows: unifying bioinformatics task conceptualization and specification through Semantic Web services. W3C Workshop on Semantic Web for Life Sciences.
1996. Where is information visualization technology going? Proceedings of the 9th annual ACM symposium on User interface software and technology. :75-77.
2015. Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
2011. Metagenomic 16S rDNA Targeted PCR-DGGE in Determining Bacterial Diversity in Aquatic Ecosystem. Bangladesh Journal of Microbiology. 27(2)
2015. Nontoxigenic Vibrio cholerae Non-O1/O139 Isolate from a Case of Human Gastroenteritis in the U.S. Gulf Coast. Journal of Clinical Microbiology. (1):9-14.
2013. Distribution of Virulence Genes in Clinical and Environmental Vibrio cholerae Strains in Bangladesh. Applied and Environmental Microbiology. (18):5782-5785.
2012. Genomic diversity of 2010 Haitian cholera outbreak strains. Proceedings of the National Academy of Sciences. :E2010-E2017.
2010. Comparative Genomics of Clinical and Environmental Vibrio Mimicus. Proceedings of the National Academy of SciencesPNAS. 107(49):21134-21139.
2014. Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing. PLoS ONE. (5):e97699.
1999. Temporal visualization for legal case histories. PROCEEDINGS OF THE ANNUAL MEETING-AMERICAN SOCIETY FOR INFORMATION SCIENCE. 36:271-279.
2005. Johns Hopkins summer workshop final report on parsing and spoken structural event detection. Johns Hopkins University, Tech. Rep.
1993. MANDATE: managing networks using database technology. IEEE Journal on Selected Areas in Communications. 11(9):1360-1372.
2008. Mutations in the Hydrophobic Core of Ubiquitin Differentially Affect Its Recognition by Receptor Proteins. Journal of Molecular Biology. 375(4):979-996.
2007. Mapping the Interactions between Lys48 and Lys63-Linked Di-ubiquitins and a Ubiquitin-Interacting Motif of S5a. Journal of Molecular Biology. 368(3):753-766.
2010. Modeling perspective using adaptor grammars. Proceedings of the 2010 Conference on Empirical Methods in Natural Language Processing. :284-292.
2007. Techniques for Classifying Executions of Deployed Software to Support Software Engineering Tasks. IEEE Transactions on Software Engineering. 33(5):287-304.
2013. Exploring Early Solutions for Automatically Identifying Inaccessible Sidewalks in the Physical World Using Google Street View. HCIC 2013.
2013. An Initial Study of Automatic Curb Ramp Detection with Crowdsourced Verification Using Google Street View Images. First AAAI Conference on Human Computation and Crowdsourcing.
2012. A feasibility study of crowdsourcing and google street view to determine sidewalk accessibility. :273-274.
2013. Improving public transit accessibility for blind riders by crowdsourcing bus stop landmark locations with Google street view. The 15th International ACM SIGACCESS Conference. :16-8.
2013. Combining Crowdsourcing and Google Street View to Identify Street-level Accessibility Problems. CHI 2013 To Appear.
2006. Geometry-guided computation of 3D electrostatics for large biomolecules. Computer Aided Geometric Design. 23(6):545-557.