Publications
2005. Evaluation Methodologies for Visual Analytics. Illuminating the Path: The Research and Development Agenda for Visual AnalyticsIlluminating the Path: The Research and Development Agenda for Visual Analytics. :150-157.
2012. Fast track article: Disaggregated water sensing from a single, pressure-based sensor: An extended analysis of HydroSense using staged experiments. Pervasive Mob. Comput.. 8(1):82-102.
2012. Disaggregated water sensing from a single, pressure-based sensor: An extended analysis of HydroSense using staged experiments. Pervasive and Mobile Computing. 8(1):82-102.
2005. Diagnostic problem solving using swarm intelligence. Swarm Intelligence Symposium, 2005. SIS 2005. Proceedings 2005 IEEE. :365-372.
2009. A cooperative combinatorial Particle Swarm Optimization algorithm for side-chain packing. IEEE Swarm Intelligence Symposium, 2009. SIS '09. :22-29.
1995. The COLLAGE/KHOROS link: Planning for image processing tasks. Integrated Planning Applications. :67-76.
1995. Scope and abstraction: Two criteria for localized planning. INTERNATIONAL JOINT CONFERENCE ON ARTIFICIAL INTELLIGENCE. 14:1612-1619.
2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology. 10(3):R25-R25.
1997. User Interfaces for a Complex Robotic Task: A Comparison of Tiles vs. Overlapped Windows. Institute for Systems Research Technical Reports.
1986. Efficient Parallel and Serial String Matching. Computer Science Department Technical Report. 221
1987. An efficient string matching algorithm with K substitutions for nucleotide and amino acid sequences*. Journal of theoretical biology. 126(4):483-490.
1985. Efficient string matching in the presence of errors. Foundations of Computer Science, 1985., 26th Annual Symposium on. :126-136.
1986. An efficient string matching algorithm with k differences for nudeotide and amino acid sequences. Nucleic acids research. 14(1):31-31.
1988. Locating alignments with k differences for nucleotide and amino acid sequences. Computer applications in the biosciences: CABIOS. 4(1):19-19.
1986. Introducing efficient parallelism into approximate string matching and a new serial algorithm. Proceedings of the eighteenth annual ACM symposium on Theory of computing. :220-230.
1989. Fast parallel and serial approximate string matching* 1. Journal of Algorithms. 10(2):157-169.
1993. Two dimensional pattern matching in a digitized image. Combinatorial Pattern Matching. :134-151.