Publications
2008. Complexity and Accessibility: Sorting in space: multidimensional, spatial, and metric data structures for CG applications. International Conference on Computer Graphics and Interactive Techniques.
2007. Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses. Emerging Infectious DiseasesEmerg Infect Dis. 13(5):713-718.
2012. GAGE: A Critical Evaluation of Genome Assemblies and Assembly Algorithms. Genome Research. 22(3):557-567.
2005. Serendipitous discovery of Wolbachia genomes in multiple Drosophila species. Genome Biology. 6(3):R23-R23.
2004. The Drosophila U1-70K Protein Is Required for Viability, but Its Arginine-Rich Domain Is Dispensable. GeneticsGenetics. 168(4):2059-2065.
2003. Driving scientific applications by data in distributed environments. Computational Science—ICCS 2003. :713-713.
2006. Register File Partitioning with Constraint Programming. System-on-Chip, 2006. International Symposium on. :1-4.
2000. Low discrepancy sets yield approximate min-wise independent permutation families. Information Processing Letters. 73(1–2):29-32.
1994. On a parallel-algorithms method for string matching problems. Lecture Notes in Computer Science. 778:22-32.
1994. Symmetry breaking for suffix tree construction. Proceedings of the twenty-sixth annual ACM symposium on Theory of computing. :300-309.
1995. Data compression using locally consistent parsing. TechnicM report, University of Maryland Department of Computer Science.
1996. Efficient approximate and dynamic matching of patterns using a labeling paradigm. Foundations of Computer Science, 1996. Proceedings., 37th Annual Symposium on. :320-328.
1994. On a parallel-algorithms method for string matching problems (overview). Algorithms and ComplexityAlgorithms and Complexity. 778:22-32.
2011. Educational advances in artificial intelligence. Proceedings of the 42nd ACM technical symposium on Computer science education. :81-82.
2009. On maximum coverage in the streaming model & application to multi-topic blog-watch. 2009 SIAM International Conference on Data Mining (SDM09).
2009. An architectural level design methodology for smart camera applications. International Journal of Embedded Systems. 4(1):83-97.
2008. Group proximity measure for recommending groups in online social networks. networks. 1(6):5-5.
2010. Dense Subgraphs with Restrictions and Applications to Gene Annotation Graphs. Research in Computational Molecular Biology. :456-472.
2010. Design and implementation of embedded computer vision systems based on particle filters. Computer Vision and Image Understanding. 114(11):1203-1214.
2006. Dataflow transformations in high-level DSP system design. Proceedings of the International Symposium on System-on-Chip, Tampere, Finland. :131-136.