Publications

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Lin C-K, Goldsman N, Mayergoyz ID, Aronowitz S, Belova N.  1999.  Advances in spherical harmonic device modeling: calibration and nanoscale electron dynamics. Simulation of Semiconductor Processes and Devices, 1999. SISPAD '99. 1999 International Conference on. :167-170.
Jimmy Lin.  2008.  Scalable language processing algorithms for the masses: a case study in computing word co-occurrence matrices with MapReduce. Proceedings of the Conference on Empirical Methods in Natural Language Processing. :419-428.
Lin HC, Goldstein S, Mendelowitz L, Zhou S, Wetzel J, Schwartz DC, Pop M.  2012.  AGORA: Assembly Guided by Optical Restriction Alignment. BMC bioinformatics. 13(1)
Lin Z, Davis LS, Doermann D, DeMenthon D.  2007.  Simultaneous appearance modeling and segmentation for matching people under occlusion. Proceedings of the 8th Asian conference on Computer vision - Volume Part II. :404-413.
Jimmy Lin, Wilbur WJ.  2009.  Modeling actions of PubMed users with n-gram language models. Information retrieval. 12(4):487-503.
Lin Z, Davis LS, Doermann D, DeMenthon D.  2007.  An Interactive Approach to Pose-Assisted and Appearance-based Segmentation of Humans. Computer Vision, 2007. ICCV 2007. IEEE 11th International Conference on. :1-8.
Jimmy Lin, Demner-Fushman D.  2005.  Evaluating Summaries and Answers: Two Sides of the Same Coin? Intrinsic and Extrinsic Evaluation Measures for Machine Translation and/or Summarization. :41-41.
Jimmy Lin, Wu P, Demner-Fushman D, Abels E.  2006.  Exploring the limits of single-iteration clarification dialogs. Proceedings of the 29th annual international ACM SIGIR conference on Research and development in information retrieval. :469-476.
Jimmy Lin, Murray GC, Dorr BJ, Hajič J, Pecina P.  2009.  A cost-effective lexical acquisition process for large-scale thesaurus translation. Language resources and evaluation. 43(1):27-40.
Jimmy Lin, Wu P, Abels E.  2008.  Toward automatic facet analysis and need negotiation: Lessons from mediated search. ACM Transactions on Information Systems (TOIS). 27(1):6:1–6:42-6:1–6:42.
Lin C-Y, Wu M, Bloom JA, Cox IJ, Miller ML, Lui YM.  2001.  Rotation, scale, and translation resilient watermarking for images. Image Processing, IEEE Transactions on. 10(5):767-782.
Jimmy Lin, Demner-Fushman D.  2006.  Will pyramids built of nuggets topple over? Proceedings of the main conference on Human Language Technology Conference of the North American Chapter of the Association of Computational Linguistics. :383-390.
Jimmy Lin, Smucker MD.  2008.  How Do Users Find Things with PubMed? Towards Automatic Utility Evaluation with User Simulations
Jimmy Lin.  2009.  The Curse of Zipf and Limits to Parallelization: A Look at the Stragglers Problem in MapReduce. Proceedings of LSDS-IR workshop. :57-62.
Jimmy Lin, Madnani N, Dorr BJ.  2010.  Putting the user in the loop: interactive Maximal Marginal Relevance for query-focused summarization. Human Language Technologies: The 2010 Annual Conference of the North American Chapter of the Association for Computational Linguistics. :305-308.
Jimmy Lin, Fushman DD.  2005.  Representation of information needs and the elements of context: A case study in the domain of clinical medicine. In Proceedings of the ACM SIGIR 2005 Workshop on Information Retrieval in Context (IRiX 2005).
Lin Z, Davis LS.  2010.  Shape-based human detection and segmentation via hierarchical part-template matching. Pattern Analysis and Machine Intelligence, IEEE Transactions on. 32(4):604-618.
Lin Z, Zhuolin Jiang, Davis LS.  2009.  Recognizing actions by shape-motion prototype trees. Computer Vision, 2009 IEEE 12th International Conference on. :444-451.
Jimmy Lin, Demner-Fushman D.  2006.  The role of knowledge in conceptual retrieval: a study in the domain of clinical medicine. Proceedings of the 29th annual international ACM SIGIR conference on Research and development in information retrieval. :99-106.
Lin Z, Davis LS.  2008.  A pose-invariant descriptor for human detection and segmentation. Computer Vision–ECCV 2008. :423-436.
Jimmy Lin.  2007.  An exploration of the principles underlying redundancy-based factoid question answering. ACM Transactions on Information Systems. 25(2)
Lin C-F, Mount SM, Jarmołowski A, Makałowski W.  2010.  Evolutionary dynamics of U12-type spliceosomal introns. BMC Evolutionary Biology. 10(1):47-47.
Jimmy Lin, DiCuccio M, Grigoryan V, Wilbur JW.  2008.  Navigating information spaces: A case study of related article search in PubMed. Information Processing & Management. 44(5):1771-1783.
Lin JJ.  2001.  Indexing and Retrieving Natural Language Using Ternary Expressions.
Jimmy Lin.  2009.  Brute force and indexed approaches to pairwise document similarity comparisons with MapReduce. Proceedings of the 32nd international ACM SIGIR conference on Research and development in information retrieval. :155-162.

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