Publications
2008. Mutations in the Hydrophobic Core of Ubiquitin Differentially Affect Its Recognition by Receptor Proteins. Journal of Molecular Biology. 375(4):979-996.
2007. Mapping the Interactions between Lys48 and Lys63-Linked Di-ubiquitins and a Ubiquitin-Interacting Motif of S5a. Journal of Molecular Biology. 368(3):753-766.
1993. MANDATE: managing networks using database technology. IEEE Journal on Selected Areas in Communications. 11(9):1360-1372.
2005. Johns Hopkins summer workshop final report on parsing and spoken structural event detection. Johns Hopkins University, Tech. Rep.
1999. Temporal visualization for legal case histories. PROCEEDINGS OF THE ANNUAL MEETING-AMERICAN SOCIETY FOR INFORMATION SCIENCE. 36:271-279.
2010. Comparative Genomics of Clinical and Environmental Vibrio Mimicus. Proceedings of the National Academy of SciencesPNAS. 107(49):21134-21139.
2012. Genomic diversity of 2010 Haitian cholera outbreak strains. Proceedings of the National Academy of Sciences. :E2010-E2017.
2011. Metagenomic 16S rDNA Targeted PCR-DGGE in Determining Bacterial Diversity in Aquatic Ecosystem. Bangladesh Journal of Microbiology. 27(2)
2015. Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proceedings of the National Academy of Sciences. (2144666966517):E2813-E2819.
2015. Nontoxigenic Vibrio cholerae Non-O1/O139 Isolate from a Case of Human Gastroenteritis in the U.S. Gulf Coast. Journal of Clinical Microbiology. (1):9-14.
2014. Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing. PLoS ONE. (5):e97699.
2013. Distribution of Virulence Genes in Clinical and Environmental Vibrio cholerae Strains in Bangladesh. Applied and Environmental Microbiology. (18):5782-5785.
1996. Where is information visualization technology going? Proceedings of the 9th annual ACM symposium on User interface software and technology. :75-77.
2004. Abstracting workflows: unifying bioinformatics task conceptualization and specification through Semantic Web services. W3C Workshop on Semantic Web for Life Sciences.
2009. Efficient systematic testing for dynamically updatable software. Proceedings of the 2nd International Workshop on Hot Topics in Software Upgrades. :9-9.
2011. Evaluating Dynamic Software Update Safety Using Systematic Testing. IEEE Transactions on Software Engineering. PP(99):1-1.
2009. A Testing Based Empirical Study of Dynamic Software Update Safety Restrictions. Technical Reports of the Computer Science Department.
2009. Efficient systematic testing for dynamically updatable software. Proceedings of the 2nd International Workshop on Hot Topics in Software Upgrades. :9:1–9:5-9:1–9:5.
2011. State transfer for clear and efficient runtime updates. 2011 IEEE 27th International Conference on Data Engineering Workshops (ICDEW). :179-184.
2007. Concurrently-secure blind signatures without random oracles or setup assumptions. Theory of Cryptography. :323-341.
2005. Building efficient and effective multimedia fingerprints via joint coding and embedding. Proceedings of the 7th workshop on Multimedia and security. :127-136.
2005. Improving collusion resistance of error correcting code based multimedia fingerprinting. Acoustics, Speech, and Signal Processing, 2005. Proceedings. (ICASSP '05). IEEE International Conference on. 2:ii/1029-ii/1032Vol.2-ii/1029-ii/1032Vol.2.