Publications
2011. Genome-Wide Survey of Natural Selection on Functional, Structural, and Network Properties of Polymorphic Sites in Saccharomyces Paradoxus. Molecular Biology and EvolutionMol Biol Evol. 28(9):2615-2627.
2010. Young Proteins Experience More Variable Selection Pressures Than Old Proteins. Genome ResearchGenome Res.. 20(11):1574-1581.
1996. Can parallel algorithms enhance serial implementation? Communications of the ACM. 39(9):88-91.
2009. Algorithmic approach to designing an easy-to-program system: Can it lead to a HW-enhanced programmer's workflow add-on? Computer Design, 2009. ICCD 2009. IEEE International Conference on. :60-63.
1983. Trade-offs between depth and width in parallel computation. Foundations of Computer Science, 1983., 24th Annual Symposium on. :146-153.
1993. A case for the PRAM as a standard programmer's model. Parallel Architectures and their Efficient Use. :11-19.
2000. Experiments with list ranking for explicit multi-threaded (XMT) instruction parallelism. J. Exp. Algorithmics. 5
2009. Optical interconnect structure in a computer system and method of transporting data between processing elements and memory through the optical interconnect structure. 10/529,310(7505822)
1984. Randomized speed-ups in parallel computation. Proceedings of the sixteenth annual ACM symposium on Theory of computing. :230-239.
2007. Plasmonics and the parallel programming problem. Society of Photo-Optical Instrumentation Engineers (SPIE) Conference Series. 6477:19-19.
1988. PRAM algorithms: teach and preach. collection of position papers, IBM-NSF Workshop on$\textbackslashbackslash$ Opportunities and Constraints of Parallel Computing", IBM Almaden.
1993. Advanced parallel prefix-sums, list ranking and connectivity. Synthesis of Parallel Algorithms. :215-257.
1995. On a Technique for Parsing a String (Invited Lecture). Lecture Notes in Computer Science. 937:386-386.
2009. Spawn-join instruction set architecture for providing explicit multithreading. 10/236,934(7523293)
2007. Models for advancing PRAM and other algorithms into parallel programs for a PRAM-On-Chip platform. IN HANDBOOK OF PARALLEL COMPUTING: MODELS, ALGORITHMS AND APPLICATIONS, EDITORS.
1987. Randomized parallel speedups for list ranking* 1. Journal of Parallel and Distributed Computing. 4(3):319-333.