Publications
2002. A history-based test prioritization technique for regression testing in resource constrained environments. Proceedings of the 24th international conference on Software engineering - ICSE '02. :119-119.
2008. Trade-offs in matching jobs and balancing load for distributed desktop grids. Future Generation Computer Systems. 24(5):415-424.
2006. A Novel Information-Aware Octree for the Visualization of Large Scale Time-Varying Data. UMIACS-TR-2006-03
2010. Mesh saliency and human eye fixations. ACM Transactions on Applied Perception (TAP). 7(2):12:1–12:13-12:1–12:13.
2006. Information-aware HyperOctree for effective isosurface rendering of large scale time-varying data. UMIACS-TR-2006-00
2007. Component-based Data Layout for Efficient Slicing of Very Large Multidimensional Volumetric Data. Scientific and Statistical Database Management, 2007. SSBDM '07. 19th International Conference on. :8-8.
2005. Comparing the Performance of High-Level Middleware Systems in Shared and Distributed Memory Parallel Environments. Parallel and Distributed Processing Symposium, 2005. Proceedings. 19th IEEE International. :30-30.
2007. Creating a Robust Desktop Grid using Peer-to-Peer Services. Parallel and Distributed Processing Symposium, 2007. IPDPS 2007. IEEE International. :1-7.
2000. An empirical study of regression test application frequency. Proceedings of the 22nd international conference on Software engineering - ICSE '00. :126-135.
2011. Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus. The ISME Journal. 6(4):835-846.
1997. Satellite DNA repeat sequence variation is low in three species of burying beetles in the genus ıt Nicrophorus (Coleoptera: Silphidae). Mol Biol Evol. 14(11):1088-1095.
2008. Implicit Flows: Can’t Live with ‘Em, Can’t Live without ‘Em. Information Systems SecurityInformation Systems Security. 5352:56-70.
2007. A unified model explaining the offsets of overlapping and near-overlapping prokaryotic genes. Molecular biology and evolution. 24(9):2091-2091.
2011. A cost-aggregating integer linear program for motif finding. Journal of Discrete Algorithms. 9(4):326-334.
2010. Assembly complexity of prokaryotic genomes using short reads. BMC Bioinformatics. 11(1):21-21.
2009. 2009 Swine-Origin Influenza A (H1N1) Resembles Previous Influenza Isolates. PLoS ONEPLoS ONE. 4(7):e6402-e6402.
2006. A compact mathematical programming formulation for DNA motif finding. Combinatorial Pattern Matching. :233-245.
2014. Vibrio metoecus sp. nov., a close relative of Vibrio cholerae isolated from coastal brackish ponds and clinical specimens. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. (Pt 95616795215116120545121):3208-3214.
2003. The Dog Genome: Survey Sequencing and Comparative Analysis. ScienceScience. 301(5641):1898-1903.
2011. Interaction of Vibrio cholerae non-O1/non-O139 with Copepods, Cladocerans and Competing Bacteria in the Large Alkaline Lake Neusiedler See, Austria. Microbial ecology. 61(3):496-506.