Publications
2009. Evidence for Bidentate Substrate Binding as the Basis for the K48 Linkage Specificity of Otubain 1. Journal of Molecular Biology. 386(4):1011-1023.
2008. Interactive High-Resolution Isosurface Ray Casting on Multicore Processors. Visualization and Computer Graphics, IEEE Transactions on. 14(3):603-614.
1988. Analysis of competition-based spreading activation in connectionist models. International journal of man-machine studies. 28(1):77-97.
2005. Anti-collusion forensics of multimedia fingerprinting using orthogonal modulation. Image Processing, IEEE Transactions on. 14(6):804-821.
2003. Resistance of orthogonal Gaussian fingerprints to collusion attacks. Multimedia and Expo, 2003. ICME '03. Proceedings. 2003 International Conference on. 1:I-617-20vol.1-I-617-20vol.1.
2009. Interactive direct volume rendering on desktop multicore processors. Concurrency and Computation: Practice and Experience. 21(17):2199-2212.
2009. Temporal Summaries: Supporting Temporal Categorical Searching, Aggregation and Comparison. Visualization and Computer Graphics, IEEE Transactions on. 15(6):1049-1056.
2008. Predictive Modeling-Based Data Collection in Wireless Sensor Networks. Wireless Sensor NetworksWireless Sensor Networks. 4913:34-51.
2007. MetaProm: a neural network based meta-predictor for alternative human promoter prediction. BMC Genomics. 8(1):374-374.
2013. Distinct Rap1 Activity States Control the Extent of Epithelial Invagination via α-Catenin. Developmental Cell. 25(3):299-309.
2010. Visual information seeking in multiple electronic health records: design recommendations and a process model. Proceedings of the 1st ACM International Health Informatics Symposium. :46-55.
2007. CLEF-2006 CL-SR at Maryland: English and Czech. Evaluation of Multilingual and Multi-modal Information Retrieval. :786-793.
2008. Reciprocity between the cerebellum and the cerebral cortex: Nonlinear dynamics in microscopic modules for generating voluntary motor commands. Complexity. 14(2):29-45.
2008. Aligning temporal data by sentinel events: discovering patterns in electronic health records. Proceedings of the twenty-sixth annual SIGCHI conference on Human factors in computing systems. :457-466.
2011. Extracting Insights from Electronic Health Records: Case Studies, a Visual Analytics Process Model, and Design Recommendations. Journal of Medical Systems. 35(5):1135-1152.
2009. Temporal Summaries: Supporting Temporal Categorical Searching, Aggregation and Comparison. IEEE Transactions on Visualization and Computer Graphics. 15(6):1049-1056.
2007. An efficient and scalable parallel algorithm for out-of-core isosurface extraction and rendering. Journal of Parallel and Distributed Computing. 67(5):592-603.
2012. A Temporal Pattern Search Algorithm for Personal History Event Visualization. Knowledge and Data Engineering, IEEE Transactions on. 24(5):799-812.
2005. Collusion resistance analysis of multimedia fingerprinting systems. IEEE Tran. on Image Processing.
2005. Generalizations of Markov model to characterize biological sequences. BMC Bioinformatics. 6(1):219-219.
2009. Context-based message expansion for disentanglement of interleaved text conversations. Proceedings of Human Language Technologies: The 2009 Annual Conference of the North American Chapter of the Association for Computational Linguistics. :200-208.
2010. Ranking under temporal constraints. Proceedings of the 19th ACM international conference on Information and knowledge management. :79-88.
2000. Adaptive Use of Iterative Methods in Predictor-Corrector Interior Point Methods for Linear Programming. Numerical Algorithms. 25:387-406.
2006. Quantifying the effects of routing dynamics on end-to-end Internet path failures. TR-05-CSE-03
2012. Differential positioning of adherens junctions is associated with initiation of epithelial folding. Nature. 484(7394):390-393.