Publications
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2008. Group proximity measure for recommending groups in online social networks. networks. 1(6):5-5.
2006. Dataflow transformations in high-level DSP system design. Proceedings of the International Symposium on System-on-Chip, Tampere, Finland. :131-136.
2010. Dense Subgraphs with Restrictions and Applications to Gene Annotation Graphs. Research in Computational Molecular Biology. :456-472.
2006. A Communication Interface for Multiprocessor Signal Processing Systems. Proceedings of the 2006 IEEE/ACM/IFIP Workshop on Embedded Systems for Real Time Multimedia. :127-132.
2011. Educational advances in artificial intelligence. Proceedings of the 42nd ACM technical symposium on Computer science education. :81-82.
1995. Data compression using locally consistent parsing. TechnicM report, University of Maryland Department of Computer Science.
1996. Efficient approximate and dynamic matching of patterns using a labeling paradigm. Foundations of Computer Science, 1996. Proceedings., 37th Annual Symposium on. :320-328.
1994. On a parallel-algorithms method for string matching problems (overview). Algorithms and ComplexityAlgorithms and Complexity. 778:22-32.
1994. On a parallel-algorithms method for string matching problems. Lecture Notes in Computer Science. 778:22-32.
1994. Symmetry breaking for suffix tree construction. Proceedings of the twenty-sixth annual ACM symposium on Theory of computing. :300-309.
2000. Low discrepancy sets yield approximate min-wise independent permutation families. Information Processing Letters. 73(1–2):29-32.
2006. Register File Partitioning with Constraint Programming. System-on-Chip, 2006. International Symposium on. :1-4.
2003. Driving scientific applications by data in distributed environments. Computational Science—ICCS 2003. :713-713.
2004. The Drosophila U1-70K Protein Is Required for Viability, but Its Arginine-Rich Domain Is Dispensable. GeneticsGenetics. 168(4):2059-2065.
2012. GAGE: A Critical Evaluation of Genome Assemblies and Assembly Algorithms. Genome Research. 22(3):557-567.
2007. Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses. Emerging Infectious DiseasesEmerg Infect Dis. 13(5):713-718.
2005. Serendipitous discovery of Wolbachia genomes in multiple Drosophila species. Genome Biology. 6(3):R23-R23.
2002. Remote thin-client access to spatial database systems. Proceedings of the 2002 annual national conference on Digital government research. :1-8.
2007. Sorting in space: multidimensional, spatial, and metric data structures for computer graphics applications. International Conference on Computer Graphics and Interactive Techniques.
2010. Multidimensional data structures for spatial applications. Algorithms and theory of computation handbookAlgorithms and theory of computation handbook. :6-6.
2003. Use of the SAND spatial browser for digital government applications. Commun. ACM. 46(1):61-64.