Publications

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Reports
Feamster N, Voellmy A, Agarwal A, Hudak P, Burnett S, Launchbury J.  2010.  Don't Configure the Network, Program It! Domain-Specific Programming Languages for Network Systems. YALEU/DCS/RR-1432
Lee W, Dagon D, Giffin J, Feamster N, Ollman G, Westby J, Wesson R, Vixie P.  2011.  Countering Botnets: Anomaly-Based Detection, Comprehensive Analysis, and Efficient Mitigation.
Dorr BJ, Voss C.  1992.  Constraining MT divergences: spatial relations in the lexicon and knowledge base.
Ramachandran A, Seetharaman S, Feamster N, Vazirani V.  2007.  Building a Better Mousetrap. GIT-CSS-07-01
Varshney A, Wright WV, Brooks Jr FP.  1993.  Bounding the number of neighbors in protein molecules. UNC-CS-TR-93-039
Kozen D, Teitelbaum T, Chen WZ, Field JH, Pugh W, Vander Zanden BT.  1987.  ALEX-an Alexical Programming Language. TR87-835
Cole R, Vishkin U.  1986.  The accelerated centroid decomposition technique for optimal parallel tree evaluation in logarithmic time, Ultracomputer Note-108.
Patents
Wen X, Vishkin U.  2009.  SYSTEM AND METHOD FOR THREAD HANDLING IN MULTITHREADED PARALLEL COMPUTING OF NESTED THREADS. 12/158,004
Agrawala AK, Varshney A, Almazan CB.  2009.  System and Method for Spatio-Temporal-Context Aware Interaction of Users .... 12/267,921
Evans F, Skiena S, Varshney A.  2002.  System and method for entering text in a virtual environment. : 09/364,433(6407679)
Swaminathan A, Mao Y, Su G-M, Gou H, Varna AL, He S, M. Wu, Oard D.  2010.  System and Method for Confidentiality-Preserving Rank-Ordered Search. 12/608,724
Vishkin U.  2009.  Spawn-join instruction set architecture for providing explicit multithreading. 10/236,934(7523293)
Lathan CE, Tracey MR, Vice JM, Druin A, Plaisant C.  2005.  Robotic apparatus and wireless communication system. 10/085,821(6895305)
Vishkin U.  2003.  Prefix sums and an application thereof. : 09/224,104(6542918)
Smolyaninov II, Vishkin U, Davis CC.  2010.  Plasmonic Systems and Devices Utilizing Surface Plasmon Polariton. 12/697,595
Vishkin U.  2009.  Optical interconnect structure in a computer system and method of transporting data between processing elements and memory through the optical interconnect structure. 10/529,310(7505822)
Vishkin U.  2004.  OPTICAL INTERCONNECT STRUCTURE IN A COMPUTER SYSTEM. (WO/2004/083904)
M. Wu, Joyce RA, Vetro A, Wong H-S, Guan L, Kung S-Y.  2005.  Dynamic network resource allocation using multimedia content features and .... 09/795,952(6947378)
Vishkin U.  2010.  Computer Memory Architecture for Hybrid Serial and Parallel Computing Systems. 12/721,252
Vishkin U, Nuzman JF.  2004.  Circuit architecture for reduced-synchrony on-chip interconnect. 10/166,008(6768336)
Journal Articles
Bederson BB, Hollan JD, Stewart J, Rogers D, Druin A, Vick D, Ring L, Grose E, Forsythe C.  1997.  A zooming web browser. Human Factors in Web Development.
Vishnoi A, Kryazhimskiy S, Bazykin GA, Hannenhalli S, Plotkin JB.  2010.  Young Proteins Experience More Variable Selection Pressures Than Old Proteins. Genome ResearchGenome Res.. 20(11):1574-1581.
Ricaldi JN, Fouts DE, Selengut JD, Harkins DM, Patra KP, Moreno A, Lehmann JS, Purushe J, Sanka R, Torres M et al..  2012.  Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity.. PLoS Negl Trop Dis. 6(10):e1853.
Li ST, Ge QJ, Varshney A.  2001.  Web-based interactive design of freeform motions. Proceedings of the ASME 2001 Design Engineering Technical Conferences and Computers and Information in Engineering Conference.
Darsa L, Costa B, Varshney A.  1998.  Walkthroughs of complex environments using image-based simplification. Computers & Graphics. 22(1):55-69.

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