Publications

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2006
Hadley D, Murphy T, Valladares O, Hannenhalli S, Ungar L, Kim J, Bućan M.  2006.  Patterns of sequence conservation in presynaptic neural genes. Genome Biology. 7(11):R105-R105.
Vaswani N, Chellappa R.  2006.  Principal components null space analysis for image and video classification. Image Processing, IEEE Transactions on. 15(7):1816-1830.
Balkan AO, Vishkin U.  2006.  Programmer's Manual for XMTC Language, XMTC Compiler and XMT Simulator. Technical Reports from UMIACS, UMIACS-TR-2005-45.
Vidal M E, Raschid L, Marquez N, Cardenas M, Wu Y.  2006.  Query Rewriting in the Semantic Web7. Data Engineering Workshops, 22nd International Conference on. :7-7.
Koo C-Y, Bhandari V, Katz J, Vaidya NH.  2006.  Reliable broadcast in radio networks: the bounded collision case. Proceedings of the twenty-fifth annual ACM symposium on Principles of distributed computing. :258-264.
Vutukuru M, Feamster N, Walfish M, Balakrishnan H, Shenker S.  2006.  Revisiting Internet addressing: Back to the future. MIT-CSAIL-TR-2006-025
Kim Y, Varshney A.  2006.  Saliency-guided Enhancement for Volume Visualization. Visualization and Computer Graphics, IEEE Transactions on. 12(5):925-932.
Madhyastha HV, Anderson T, Krishnamurthy A, Spring N, Venkataramani A.  2006.  A structural approach to latency prediction. Proceedings of the 6th ACM SIGCOMM conference on Internet measurement. :99-104.
Gross KC, Urmanov A, Votta LG, McMaster S, Porter A.  2006.  Towards Dependability in Everyday Software Using Software Telemetry. Engineering of Autonomic and Autonomous Systems, IEEE International Workshop on. :9-18.
Lee B, Parr CS, Plaisant C, Bederson BB, Veksler VD, Gray WD, Kotfila C.  2006.  TreePlus: Interactive Exploration of Networks with Enhanced Tree Layouts. Visualization and Computer Graphics, IEEE Transactions on. 12(6):1414-1426.
Kim Y, Lee C H, Varshney A.  2006.  Vertex–transformation streams. Graphical Models. 68(4):371-383.
2007
Varna AL, He S, Swaminathan A, M. Wu.  2007.  Analysis of Nonlinear Collusion Attacks on Fingerprinting Systems for Compressed Multimedia. Image Processing, 2007. ICIP 2007. IEEE International Conference on. 2:II-133-II-136-II-133-II-136.
Ramachandran A, Seetharaman S, Feamster N, Vazirani V.  2007.  Building a Better Mousetrap. GIT-CSS-07-01
Varna AL, He S, Swaminathan A, M. Wu, Lu H, Lu Z.  2007.  Collusion-Resistant Fingerprinting for Compressed Multimedia Signals. Acoustics, Speech and Signal Processing, 2007. ICASSP 2007. IEEE International Conference on. 2:II-165-II-168-II-165-II-168.
Shen CC, Kupershtok R, Yang B, Vanin FM, Shao X, Sheth D, Goldsman N, Balzano Q, Bhattacharyya SS.  2007.  Compact, low power wireless sensor network system for line crossing recognition. Circuits and Systems, 2007. ISCAS 2007. IEEE International Symposium on. :2506-2509.
Leparc GG, Mitra RD, Vardhanabhuti S, Wang J, Hannenhalli S, Smit S, Widmann J, Knight R, Wu S, Zhang Y et al..  2007.  COMPUTATIONAL BIOLOGY. Nucleic acids research. 35(9-12):3163-3163.
Swaminathan A, Mao Y, Su G-M, Gou H, Varna AL, He S, M. Wu, Oard D.  2007.  Confidentiality-preserving rank-ordered search. Proceedings of the 2007 ACM workshop on Storage security and survivability. :7-12.
Eddins MJ, Varadan R, Fushman D, Pickart CM, Wolberger C.  2007.  Crystal Structure and Solution NMR Studies of Lys48-linked Tetraubiquitin at Neutral pH. Journal of Molecular Biology. 367(1):204-211.
Dickinson BC, Varadan R, Fushman D.  2007.  Effects of cyclization on conformational dynamics and binding properties of Lys48-linked di-ubiquitin. Protein Science. 16(3):369-378.
Wang Q, JaJa JF, Varshney A.  2007.  An efficient and scalable parallel algorithm for out-of-core isosurface extraction and rendering. Journal of Parallel and Distributed Computing. 67(5):592-603.
Peckerar M, Sander D, Srivastava A, Foli A, Vishkin U.  2007.  Electron beam and optical proximity effect reduction for nanolithography: New results. Journal of Vacuum Science & Technology B. 25(6):2288-2294.
Hochstein L, Nakamura T, Shull F, Zazworka N, Voelp M, Zelkowitz MV, Basili VR.  2007.  An Environment of Conducting Families of Software Engineering Experiments.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN et al..  2007.  Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450(7167):203-218.

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