Publications
2009. A phylogenetic mixture model for the evolution of gene expression. Molecular biology and evolution. 26(10):2363-2363.
2000. Speed vs. Accuracy in Simulation for I/O-Intensive Applications. Parallel and Distributed Processing Symposium, International. :315-315.
1998. LBF: a performance metric for program reorganization. 18th International Conference on Distributed Computing Systems, 1998. Proceedings. :222-229.
2001. Achieving Efficiency and Accuracy in Simulation for I/O-Intensive Applications. Journal of Parallel and Distributed Computing. 61(12):1732-1750.
2001. A tool to help tune where computation is performed. IEEE Transactions on Software Engineering. 27(7):618-629.
2009. Network-aware forward caching. Proceedings of the 18th international conference on World wide web. :291-300.
2000. Visualization 2000.
2009. Dynamic Provable Data Possession. CCS '09 Proceedings of the 16th ACM Conference on Computer and Communications Security . :213-222.
2004. Polylysogeny and prophage induction by secondary infection in Vibrio cholerae. Environmental Microbiology. 6(7):760-763.
2008. Computational Analysis of Constraints on Noncoding Regions, Coding Regions and Gene Expression in Relation to Plasmodium Phenotypic Diversity. PLoS ONEPLoS ONE. 3(9):e3122-e3122.
2009. CTCF binding site classes exhibit distinct evolutionary, genomic, epigenomic and transcriptomic features. Genome Biology. 10(11):R131-R131.
2015. Rapid Proliferation of Vibrio parahaemolyticus, Vibrio vulnificus, and Vibrio cholerae during Freshwater Flash Floods in French Mediterranean Coastal Lagoons. Applied and Environmental Microbiology. (21):7600-7609.
1997. Multiscale Document Page Segmentation Using Soft Decision Integration. IEEE Transactions on Pattern Analysis and Machine Intelligence. :92-96.
1994. Document page decomposition by integration of distributed soft decisions. International Conference on Neural Networks. :4022-4027.
1990. Limited scope and circumscriptive reasoning. International Journal of Expert Systems. 3(3):207-217.
2006. Structure of social contact networks and their impact on epidemics. DIMACS Series in Discrete Mathematics and Theoretical Computer Science. 70:181-181.
2004. Structural and algorithmic aspects of massive social networks. Proceedings of the fifteenth annual ACM-SIAM symposium on Discrete algorithms. :718-727.
2006. Conservation Patterns in cis-Elements Reveal Compensatory Mutations. Comparative GenomicsComparative Genomics. 4205:186-199.