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Cummings MP, Segal MR.  2004.  Few amino acid positions in ıt rpoB are associated with most of the rifampin resistance in ıt Mycobacterium tuberculosis. BMC Bioinformatics. 5:137-137.
Cummings MP, Neel MC, Shaw KL.  2008.  A GENEALOGICAL APPROACH TO QUANTIFYING LINEAGE DIVERGENCE. Evolution. 62(9):2411-2422.
Cummings MP, Myers DS, Mangelson M.  2004.  Applying permutation tests to tree-based statistical models: extending the R package rpart. 2004-24
Cummings MP.  1992.  Copia-like retrotransposons in plants: a brief introduction. The Plant Genetics Newsletter. 8(4):38-41.
Cummings MP, Meyer A.  2005.  Magic bullets and golden rules: data sampling in molecular phylogenetics. Zoology (Jena). 108(4):329-336.
Cummings MP, Temple GG.  2010.  Broader incorporation of bioinformatics in education: opportunities and challenges. Brief Bioinform. 11(537-543)
Cummings MP, Huskamp JC.  2005.  Grid computing. EDUCAUSE Review. 40:116-117.
Cummings MP, Nugent JM, Olmstead RG, Palmer JD.  2003.  Phylogenetic analysis reveals five independent transfers of the chloroplast gene ıt rbcL to the mitochondrial genome in angiosperms. Curr Genet. 43(2):131-138.
Cummings MP.  2004.  A book like its cover. Heredity. 93(2):234-235.
Cummings MP, Welschmeyer NA.  1998.  Pigment composition of putatively achlorophyllous angiosperms. Plant Syst Evol. 210(1-2):105-111.
Cummings MP, Otto SP, Wakeley J.  1995.  Sampling properties of DNA sequence data in phylogenetic analysis. Mol Biol Evol. 12(5):814-822.
Cummings MP, King LM, Kellogg EA.  1994.  Slipped-strand mispairing in a plastid gene: ıt rpoC2 in grasses (Poaceae). Mol Biol Evol. 11(1):1-8.
Cummings MP, Otto SP, Wakeley J.  1999.  Genes and other samples of DNA sequence data for phylogenetic inference. The Biological Bulletin. 196(3):345-350.
Cummings MP, Clegg MT.  1998.  Nucleotide sequence diversity at the alcohol dehydrogenase 1 locus in wild barley (ıt Hordeum vulgare ssp. ıt spontaneum): an evaluation of the background selection hypothesis. Proc Natl Acad Sci USA. 95(10):5637-5642.
Cummings MP.  1991.  Review of Fundamentals of Molecular Evolution, by Li. W.-H. and D. Graur. Cladistics. 7:310-312.
Cummings MP, Handley SA, Myers DS, Reed DL, Rokas A, Winka K.  2003.  Comparing bootstrap and posterior probability values in the four-taxon case. Syst Biol. 52(4):477-487.
Cummings MP.  1994.  Transmission patterns of eukaryotic transposable elements - arguments for and against horizontal transfer. Trends Ecol Evol. 9(4):141-145.
Cummings MP, Myers DS.  2004.  Simple statistical models predict C-to-U edited sites in plant mitochondrial RNA. BMC Bioinformatics. 5:132-132.
Cunha Í, Teixeira R, Feamster N, Diot C.  2008.  Distinguishing persistent failures from transient losses. Proceedings of the 2008 ACM CoNEXT Conference. :50:1–50:2-50:1–50:2.
Cunha Í, Teixeira R, Feamster N, Diot C.  2009.  Measurement methods for fast and accurate blackhole identification with binary tomography. Proceedings of the 9th ACM SIGCOMM conference on Internet measurement conference. :254-266.
Cuntoor NP, Chellappa R.  2007.  Mixed-state models for nonstationary multiobject activities. EURASIP J. Appl. Signal Process.. 2007(1):106-106.
Cuntoor N, Kale A, Chellappa R.  2003.  Combining multiple evidences for gait recognition. Acoustics, Speech, and Signal Processing, 2003. Proceedings. (ICASSP '03). 2003 IEEE International Conference on. 3:III-33-6vol.3-III-33-6vol.3.
Cuntoor NP, Yegnanarayana B, Chellappa R.  2005.  Interpretation of state sequences in HMM for activity representation. Proc. IEEE Conf. Acoustic Speech and Signal Processing. 2:709-712.
Cuntoor NP, Yegnanarayana B, Chellappa R.  2008.  Activity Modeling Using Event Probability Sequences. Image Processing, IEEE Transactions on. 17(4):594-607.
Cuntoor NP, Chellappa R.  2007.  Epitomic Representation of Human Activities. Computer Vision and Pattern Recognition, 2007. CVPR '07. IEEE Conference on. :1-8.

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