Publications

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2012
Huttenhower C, Gevers D, Knight R, Abubucker S, Badger JH, Chinwalla AT, Creasy HH, Earl AM, Fitzgerald MG, Fulton RS et al..  2012.  Structure, function and diversity of the healthy human microbiome. Nature. 486:207-214.
Martineau J, Mokashi R, Chapman D, Grasso M, Brady M, Yesha Y, Yesha Y, Cardone A, Dima A.  2012.  Sub-cellular feature detection and automated extraction of collocalized actin and myosin regions. the 2nd ACM SIGHIT symposiumProceedings of the 2nd ACM SIGHIT symposium on International health informatics - IHI '12. :399.
Zhuolin Jiang, Zhang G, Davis LS.  2012.  Submodular Dictionary Learning for Sparse Coding. IEEE conference on Computer Vision and Pattern Recognition.
Campbell T, Larson E, Cohn G, Alcaide R, Froehlich J, Patel S.  2012.  Systems and Methods for Energy Harvesting in a Contained Fluid Circuit.
2013
Ye Q, Doermann D.  2013.  Scene Text Detection via Integrated Discrimination of Component Appearance and Consensus.
Chalfoun J, Kociolek M, Dima A, Halter M, Cardone A, Peskin A, Bajcsy P, Brady M.  2013.  Segmenting time-lapse phase contrast images of adjacent NIH 3T3 cells.. Journal of microscopy. 249(1):41-52.
Papamanthou C, Shi E, Tamassia R.  2013.  Signatures of Correct Computation. Theory of Cryptography. :222-242.
Mozumder PK, Nahar S, M Naser N, Alam M, Huq A, R Sack B, Colwell RR.  2013.  Species composition of limnetic zooplankton from the southern coastal areas (Mathbaria and Bakerganj) in Bangladesh. Journal of the Asiatic Society of Bangladesh, Science. 38(1)
Cardone A, Pant H, Hassan SA.  2013.  Specific and Non-Specific Protein Association in Solution: Computation of Solvent Effects and Prediction of First-Encounter Modes for Efficient Configurational Bias Monte Carlo Simulations. The Journal of Physical Chemistry B. 117(41):12360-12374.
Boyd-Graber J, Glasgow K, Zajac JS.  2013.  Spoiler Alert: Machine Learning Approaches to Detect Social Media Posts with Revelatory Information.
Papamanthou C, Shi E, Tamassia R, Yi K.  2013.  Streaming Authenticated Data Structures. Advances in Cryptology – EUROCRYPT 2013. :353-370.
Kumar J, Ye P, Doermann D.  2013.  Structural similarity for document image classification and retrieval. Pattern Recognition Letters.
Dumitras T, Narasimhan P.  2013.  A study of unpredictability in fault-tolerant middleware. Computer Networks. 57(3):682-698.
2015
Jutla A, Aldaach H, Billian H, Akanda A, Huq A, Colwell RR.  2015.  Satellite Based Assessment of Hydroclimatic Conditions Related to Cholera in Zimbabwe. PLOS ONE. (9Suppl 1):e0137828.
Cardone A, Chalfoun J, Peskin A, Bajcsy P, Kociolek M, Bhadriraju K, Brady M.  2015.  Segmentation and sub-cellular feature-based analysis of microscopy images. BioImage Informatics Conference .
Bajcsy P, Cardone A, Chalfoun J, Halter M, Juba D, Kociolek M, Majurski M, Peskin A, Simon C, Simon M et al..  2015.  Survey statistics of automated segmentations applied to optical imaging of mammalian cells. BMC bioinformatics. 16:1.
2016
Phelps C, Madhavan G, Rappuoli R, LEVIN SCOTT, Shortlife E, Colwell RR.  2016.  Strategic Planning in Population Health and Public Health Practice: A Call to Action for Higher Education. The Milbank Quarterly. 94906033(143S2):109-125.
2017
Connelly S., Bristol J.A., Hubert S., Subramanian P., Hasan N.A., Colwell RR, Kaleko M..  2017.  SYN-004 (ribaxamase), an oral beta-lactamase, mitigates antibiotic-mediated dysbiosis in a porcine gut microbiome model. Journal of Applied Microbiology. (1Suppl 11):66-79.
2018
Akanda A, Aziz S, Jutla A, Huq A, Alam M, Ahsan G, Colwell RR.  2018.  Satellites and Cell Phones Form a Cholera Early-Warning System. Eos. 99
Carlson CJ, Getz WM, Kausrud KL, Cizauskas CA, Blackburn JK, Carrillo FABustos, Colwell RR, W. Easterday R, Ganz HH, Kamath PL et al..  2018.  Spores and soil from six sides: interdisciplinarity and the environmental biology of anthrax (Bacillus anthracis). Biological Reviews. (4):1813-1831.

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