Publications

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Journal Articles
Khuller S, Mitchell SG, Vazirani VV.  1992.  Processor efficient parallel algorithms for the two disjoint paths problem and for finding a Kuratowski homeomorph. SIAM Journal on Computing. 21:486-486.
Vaswani N, Chellappa R.  2006.  Principal components null space analysis for image and video classification. Image Processing, IEEE Transactions on. 15(7):1816-1830.
Khuller S, Vishkin U, Young N.  1994.  A primal-dual parallel approximation technique applied to weighted set and vertex covers. Journal Algorithms. 17(2):280-289.
Vardhanabhuti S, Wang J, Hannenhalli S.  2007.  Position and distance specificity are important determinants of cis-regulatory motifs in addition to evolutionary conservation. Nucleic Acids Research. 35(10):3203-3213.
Stantchev G, Juba D, Dorland W, Varshney A.  2007.  Plasma Turbulence Simulation and Visualization on Graphics Processors: Efficient Parallel Computing on the Desktop. Bulletin of the American Physical Society. Volume 52, Number 11
Khuller S, Vazirani VV.  1991.  Planar graph coloring is not self-reducible, assuming P ≠ NP. Theoretical Computer Science. 88(1):183-189.
Hochstein L, Basili VR, Vishkin U, Gilbert J.  2008.  A pilot study to compare programming effort for two parallel programming models. Journal of Systems and Software. 81(11):1920-1930.
Azarian T, Ali A, Johnson JA, Mohr D, Prosperi M, Veras NM, Jubair M, Strickland SL, Rashid MH, Alam MT et al..  2014.  Phylodynamic Analysis of Clinical and Environmental Vibrio cholerae Isolates from Haiti Reveals Diversification Driven by Positive Selection. mBio. (6)
Kim Y, Varshney A.  2008.  Persuading Visual Attention through Geometry. Visualization and Computer Graphics, IEEE Transactions on. 14(4):772-782.
Chuang WH, Varna AL, Wu M.  2010.  Performance impact of ordinal ranking on content fingerprinting. IEEE Int. Conf. on Image Processing.
Hadley D, Murphy T, Valladares O, Hannenhalli S, Ungar L, Kim J, Bućan M.  2006.  Patterns of sequence conservation in presynaptic neural genes. Genome Biology. 7(11):R105-R105.
Landau GM, Vishkin U.  1994.  Pattern matching in a digitized image. Algorithmica. 12(4):375-408.
Motiwala M, Feamster N, Vempala S.  2007.  Path splicing: Reliable connectivity with rapid recovery. ACM SIGCOMM HotNets VI.
Motiwala M, Elmore M, Feamster N, Vempala S.  2008.  Path splicing. SIGCOMM Comput. Commun. Rev.. 38(4):27-38.
Vaswani N, Chellappa R.  2003.  A particle filtering approach to abnormality detection in nonlinear systems and its application to abnormal activity detection. 3rd Int’l Workshop on Statistical and Computational Theories of Vision, Nice, France.
Vishkin U.  1984.  A parallel-design distributed-implementation (PDDI) general-purpose computer. Theoretical Computer Science. 32(1-2):157-172.
Sahinalp SC, Vishkin U.  1994.  On a parallel-algorithms method for string matching problems. Lecture Notes in Computer Science. 778:22-32.
Juba D, Varshney A.  2008.  Parallel, stochastic measurement of molecular surface area. Journal of Molecular Graphics and Modelling. 27(1):82-87.
Shiloach Y, Vishkin U, An O.  1982.  parallel MAX-FLOW algorithm. Journal of Algorithms. 3:128-146.
Berkman O, Vishkin U.  1993.  On parallel integer merging. Information and Computation. 106(2):266-285.
Matias Y, Vishkin U.  1991.  On parallel hashing and integer sorting. Journal of Algorithms. 12(4):573-606.
Juba D, Cardone A, Ip C Y, Simon Jr CG, K Tison C, Kumar G, Brady M, Varshney A.  2013.  Parallel geometric classification of stem cells by their three-dimensional morphology. Computational Science & Discovery. 6(1):015007.
Maon Y, Schieber B, Vishkin U.  1986.  Parallel ear decomposition search (EDS) and st-numbering in graphs. Theoretical Computer Science. 47:277-298.
Paul W, Vishkin U, Wagener H.  1983.  Parallel dictionaries on 2–3 trees. Automata, Languages and Programming. :597-609.
Apostolico A, Iliopoulos C, Landau GM, Schieber B, Vishkin U.  1988.  Parallel construction of a suffix tree with applications. Algorithmica. 3(1):347-365.

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