Publications

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Journal Articles
Maon Y, Schieber B, Vishkin U.  1986.  Parallel ear decomposition search (EDS) and st-numbering in graphs. Theoretical Computer Science. 47:277-298.
Juba D, Cardone A, Ip C Y, Simon Jr CG, K Tison C, Kumar G, Brady M, Varshney A.  2013.  Parallel geometric classification of stem cells by their three-dimensional morphology. Computational Science & Discovery. 6(1):015007.
Matias Y, Vishkin U.  1991.  On parallel hashing and integer sorting. Journal of Algorithms. 12(4):573-606.
O'Leary DP.  1987.  Parallel implementation of the block conjugate gradient algorithm. Parallel Computing. 5(1–2):127-139.
Martin, M.P, Candler GV.  2006.  A parallel implicit method for the direct numerical simulation of wall-bounded compressible turbulence. Journal of Computational Physics. 215(1):153-171.
Berkman O, Vishkin U.  1993.  On parallel integer merging. Information and Computation. 106(2):266-285.
Shiloach Y, Vishkin U, An O.  1982.  parallel MAX-FLOW algorithm. Journal of Algorithms. 3:128-146.
Raschid L, Su SYW.  1992.  A parallel pipelined strategy for evaluating linear recursive predicates in a multiprocessor environment.. J. Parallel Distrib. Comput.. 14(2):146-162.
D'Autrechy CL, Reggia JA.  1989.  Parallel plan execution with self-processing networks. Telematics and Informatics. 6(3-4):145-157.
O'Leary DP, Whitman P.  1990.  Parallel QR factorization by householder and modified Gram-Schmidt algorithms. Parallel Computing. 16(1):99-112.
Zhang G, Elman H.  1992.  Parallel sparse Cholesky factorization on a shared memory multiprocessor. Parallel Computing. 18(9):1009-1022.
Juba D, Varshney A.  2008.  Parallel, stochastic measurement of molecular surface area. Journal of Molecular Graphics and Modelling. 27(1):82-87.
Resnik P.  1998.  Parallel strands: A preliminary investigation into mining the web for bilingual text. Machine Translation and the Information Soup. :72-82.
Rambow O, Dorr BJ, Farwell D, Green R, Habash N, Helmreich S, Hovy E, Levin L, Miller KJ, Mitamura T et al..  2006.  Parallel syntactic annotation of multiple languages. Proceedings of the Fifth International Conference on Language Resources and Evaluation (LREC2006). Genoa, Italy.
Sahinalp SC, Vishkin U.  1994.  On a parallel-algorithms method for string matching problems. Lecture Notes in Computer Science. 778:22-32.
Vishkin U.  1984.  A parallel-design distributed-implementation (PDDI) general-purpose computer. Theoretical Computer Science. 32(1-2):157-172.
Tai G-C, Korman CE, Mayergoyz ID.  1994.  A parallel-in-time method for the transient simulation of SOI devices with drain current overshoots. Computer-Aided Design of Integrated Circuits and Systems, IEEE Transactions on. 13(8):1035-1044.
O’Leary DP, Brennen GK, Bullock SS.  2006.  Parallelism for quantum computation with qudits. Physical Review APhys. Rev. A. 74(3):032334-032334.
Teng YA, Mount D, Puppo E, Davis LS.  1997.  Parallelizing and algorithm for visibility on polyhedral terrain. International Journal of Computational Geometry and Applications. 7(1/2):75-84.
Bhattacharya B, Bhattacharyya SS.  2001.  Parameterized dataflow modeling for DSP systems. Signal Processing, IEEE Transactions on. 49(10):2408-2421.
Ko M-Y, Zissulescu C, Puthenpurayil S, Bhattacharyya SS, Kienhuis B, Deprettere EF.  2007.  Parameterized Looped Schedules for Compact Representation of Execution Sequences in DSP Hardware and Software Implementation. IEEE Transactions on Signal Processing. 55(6):3126-3138.
Nagarajan N, Pop M.  2009.  Parametric Complexity of Sequence Assembly: Theory and Applications to Next Generation Sequencing. Journal of Computational Biology. 16(7):897-908.
Gerber R, Pugh W, Saksena M.  1995.  Parametric dispatching of hard real-time tasks. IEEE Transactions on ComputersIEEE Trans. Comput.. 44(3):471-479.
Papamanthou C, Paparrizos K, Samaras N.  2005.  A parametric visualization software for the assignment problem. Yugoslav Journal of Operations Research. 15(1):147-158.
Dasigi VR, Reggia JA.  1989.  Parsimonious covering as a method for natural language interfaces to expert systems* 1. Artificial Intelligence in Medicine. 1(1):49-60.

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