Publications
2012. InterPro in 2011: new developments in the family and domain prediction database.. Nucleic Acids Res. 40(Database issue):D306-12.
2012. The Provenance of WINE. Dependable Computing Conference (EDCC), 2012 Ninth European. :126-131.
2011. Evaluating Dynamic Software Update Safety Using Systematic Testing. IEEE Transactions on Software Engineering. PP(99):1-1.
2011. ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.. BMC Bioinformatics. 12:434.
2009. Tool supported detection and judgment of nonconformance in process execution. Empirical Software Engineering and Measurement, 2009. ESEM 2009. 3rd International Symposium on. :312-323.
2008. 1st ACM workshop on hot topics in software upgrades (HotSWUp 2008). OOPSLA Companion'08 Companion to the 23rd ACM SIGPLAN Conference on Object-Oriented Programming Systems Languages and Applications. :837-838.
2008. The ASC-Alliance Projects: A Case Study of Large-Scale Parallel Scientific Code Development. Computer. 41(3):50-58.
2006. Balancing Systematic and Flexible Exploration of Social Networks. IEEE Transactions on Visualization and Computer Graphics. 12(5):693-700.
2005. And away we go: understanding the complexity of launching complex HPC applications. Proceedings of the second international workshop on Software engineering for high performance computing system applications. :45-49.
2005. Software process improvement in small organizations: a case study. Software, IEEE. 22(6):68-75.
2003. On the use of flow migration for handling short-term overloads. Global Telecommunications Conference, 2003. GLOBECOM '03. IEEE. 6:3108-3112vol.6-3108-3112vol.6.
2003. User interface evaluation and empirically-based evolution of a prototype experience management tool. Software Engineering, IEEE Transactions on. 29(9):838-850.
2003. The virtual microscope. IEEE Transactions on Information Technology in Biomedicine. 7(4):230-248.
2002. Maintaining software with a security perspective. Software Maintenance, 2002. Proceedings. International Conference on. :194-203.
2002. An operational process for goal-driven definition of measures. Software Engineering, IEEE Transactions on. 28(12):1106-1125.
2002. A recognition algorithm for Chinese characters in diverse fonts. Image Processing. 2002. Proceedings. 2002 International Conference on. 3:981-984vol.3-981-984vol.3.
2002. What we have learned about fighting defects. Software Metrics, 2002. Proceedings. Eighth IEEE Symposium on. :249-258.
2001. An experience management system for a software engineering research organization. Software Engineering Workshop, 2001. Proceedings. 26th Annual NASA Goddard. :29-35.
2001. Hierarchical GUI test case generation using automated planning. Software Engineering, IEEE Transactions on. 27(2):144-155.